Large-scale biological sequence assembly and alignment by using computing grid

Shi, Wei and Zhou, Wanlei 2004, Large-scale biological sequence assembly and alignment by using computing grid, Lecture notes in computer science, vol. 3032, pp. 26-33.

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Title Large-scale biological sequence assembly and alignment by using computing grid
Author(s) Shi, Wei
Zhou, Wanlei
Journal name Lecture notes in computer science
Volume number 3032
Start page 26
End page 33
Publisher Springer-Verlag
Place of publication Berlin, Germany
Publication date 2004
ISSN 0302-9743
1611-3349
Summary Large-scale sequence assembly and alignment are fundamental parts of biological computing. However, most of the large-scale sequence assembly and alignment require intensive computing power and normally take very long time to complete. To speedup the assembly and alignment process, this paper parallelizes the Euler sequence assembly and pair-wise/multiple sequence assembly, two important sequence assembly methods, and takes advantage of Computing Grid which has a colossal computing capacity to meet the large-scale biological computing demand.
Language eng
Field of Research 080201 Analysis of Algorithms and Complexity
HERDC Research category C1 Refereed article in a scholarly journal
Copyright notice ©2004, Springer-Verlag
Persistent URL http://hdl.handle.net/10536/DRO/DU:30002376

Document type: Journal Article
Collection: School of Information Technology
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