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Using mitochondrial nucleotide sequences to investigate diversity and genealogical relationships within common carp (Cyprinus carpio L.)

Thai, B., Burridge, C., Pham, T. and Austin, C. 2005, Using mitochondrial nucleotide sequences to investigate diversity and genealogical relationships within common carp (Cyprinus carpio L.), Animal genetics, vol. 36, no. 1, pp. 23-28, doi: 10.1111/j.1365-2052.2004.01215.x.

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Title Using mitochondrial nucleotide sequences to investigate diversity and genealogical relationships within common carp (Cyprinus carpio L.)
Author(s) Thai, B.
Burridge, C.
Pham, T.
Austin, C.ORCID iD for Austin, C. orcid.org/0000-0003-1848-6267
Journal name Animal genetics
Volume number 36
Issue number 1
Start page 23
End page 28
Publisher Blackwell Publishing Ltd
Place of publication Oxford, England
Publication date 2005-02
ISSN 0268-9146
1365-2052
Keyword(s) common carp
Cyprinus carpio
D-loop region
diversity
genealogy
mitochondrial DNA sequence
MTATPase6/MTATPase8
taxonomy
Summary Direct sequencing of mitochondrial DNA (mtDNA) D-loop (745 bp) and MTATPase6/MTATPase8 (857 bp) regions was used to investigate genetic variation within common carp and develop a global genealogy of common carp strains. The D-loop region was more variable than the MTATPase6/MTATPase8 region, but given the wide distribution of carp the overall levels of sequence divergence were low. Levels of haplotype diversity varied widely among countries with Chinese, Indonesian and Vietnamese carp showing the greatest diversity whereas Japanese Koi and European carp had undetectable nucleotide variation. A genealogical analysis supports a close relationship between Vietnamese, Koi and Chinese Color carp strains and to a lesser extent, European carp. Chinese and Indonesian carp strains were the most divergent, and their relationships do not support the evolution of independent Asian and European lineages and current taxonomic treatments.
Language eng
DOI 10.1111/j.1365-2052.2004.01215.x
Field of Research 060411 Population, Ecological and Evolutionary Genetics
HERDC Research category C1 Refereed article in a scholarly journal
HERDC collection year 2004
Copyright notice ©2004, International Society for Animal Genetics
Persistent URL http://hdl.handle.net/10536/DRO/DU:30002799

Document type: Journal Article
Collection: School of Ecology and Environment
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