CIDB: Chlamydia Interactive Database for cross-querying genomics, transcriptomics and proteomics data

Chen, Yan, Timms, Peter and Chen, Yi-Ping Phoebe 2007, CIDB: Chlamydia Interactive Database for cross-querying genomics, transcriptomics and proteomics data, Biomolecular engineering, vol. 24, no. 6, pp. 603-608.

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Title CIDB: Chlamydia Interactive Database for cross-querying genomics, transcriptomics and proteomics data
Author(s) Chen, Yan
Timms, Peter
Chen, Yi-Ping Phoebe
Journal name Biomolecular engineering
Volume number 24
Issue number 6
Start page 603
End page 608
Publisher Elsevier
Place of publication Amsterdam, Netherlands
Publication date 2007-11
ISSN 1389-0344
Keyword(s) genomics
transcriptomics
proteomics chlamydia data
Summary Chlamydiae are important pathogens of humans, birds and a wide range of animals. They are a unique group of bacteria, characterized by their developmental cycle. Chlamydia has been difficult to study because of their obligate intracellular growth habit and lack of a genetic transformation system. However, the past 5 years has seen the full genome sequencing of seven strains of Chlamydia and a rapid expansion of genomic, transcriptomic (RT-PCR, microarray) and proteomic analysis of these pathogens. The Chlamydia Interactive Database (CIDB) described here is the first database of its type that holds genomic, RT-PCR, microarray and proteomics data sets that can be cross-queried by researchers for patterns in the data. Combining the data of many research groups into a single database and cross-querying from different perspectives should enhance our understanding of the complex cell biology of these pathogens. The database is available at: http://www3.it.deakin.edu.au:8080/CIDB/.
Language eng
Field of Research 080199 Artificial Intelligence and Image Processing not elsewhere classified
HERDC Research category C1 Refereed article in a scholarly journal
Copyright notice ©2007, Elsevier B.V.
Persistent URL http://hdl.handle.net/10536/DRO/DU:30007573

Document type: Journal Article
Collection: School of Engineering and Information Technology
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