Cloud computing is an emerging technology and it utilizes the cloud power to many technical solutions. The e-learning solution is one of those technologies where it implements the cloud power in its existing system to enhance the functionality providing to e-learners. Cloud technology has numerous advantages over the existing traditional e-learning systems. However security is a major concern in cloud based e-learning. Therefore security measures are unavoidable to prevent the loss of users’ valuable data from the security vulnerabilities. This paper investigates various security issues involved in cloud based e-learning technology with an aim to suggest remedial in the form of security measures and security management standards. These will help to overcome the security threats in cloud based e-learning technology. Solving the key problems will also encourage the widespread adoption of cloud computing in educational institutes.