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Genome sequence of Ensifer sp. TW10, a Tephrosia wallichii (Biyani) microsymbiont native to the Indian Thar Desert

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journal contribution
posted on 2013-01-01, 00:00 authored by N Tak, H Gehlot, M Kaushik, S Choudhary, R Tiwari, R Tian, Y Hill, Lambert BrauLambert Brau, L Goodwin, J Han, K Liolios, M Huntemann, K Palaniappan, A Pati, K Mavromatis, N Ivanova, V Markowitz, T Woyke, N Kyrpides, W Reeve
Ensifer sp. TW10 is novel N2-fixingbacterium isolated from a root nodule of the perennial legume Tephrosia wallichii Graham (known locally as Biyani) found in the Great Indian (or Thar) desert, a large arid regionin the northwestern part of the Indian subcontinent. Strain TW10 is a Gram-negative, rod shaped,aerobic, motile, non-spore forming, species of root nodule bacteria (RNB) that promiscuously nodulates legumes in Thar Desert alkaline soil. It is fast growing, acid-producing, and tolerates up to 2% NaCl and capable of growth at 40C. In this report we describe for the first time the primary features of this Thar Desert soil saprophyte together with genome sequence informationand annotation. The 6,802,256 bp genome has a GC content of 62% and is arranged into 57 scaffolds containing 6,470 protein-coding genes, 73 RNA genes and asingle rRNA operon. This genome is one of 100 RNB genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.

History

Journal

Standards in genomic sciences

Volume

9

Pagination

304 - 314

Location

East Lansing, Mich.

Open access

  • Yes

ISSN

1944-3277

Language

eng

Publication classification

C1 Refereed article in a scholarly journal

Copyright notice

2013, The Authors