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Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain SRDI943

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journal contribution
posted on 2013-01-01, 00:00 authored by W Reeve, E Drew, R Ballard, V Melino, R Tian, M De, Lambert BrauLambert Brau, M Ninawi, H Daligault, K Davenport, T Erkkila, L Goodwin, W Gu, C Munk, H Teshima, Y Xu, P Chain, N Kyrpides
Rhizobium leguminosarum bv. trifolii SRDI943(syn. V2-2) is an aerobic, motile, Gram-negative, non-spore-forming rod. SRDI943was isolated from a nodule recovered from the roots of the annual clover Trifoliummichelianum savi cv. paradanathat had been inoculated with a soil collected from a mixed pasture in Victoria, Australia. SRDI943 has a broadhost range for nodulation within the clover genus, however N2-fixationis sub-optimal (20-54% of reference strain WSM1325) on T. subterraneum spp.Here we describe the features of R. leguminosarum bv. trifolii strain SRDI943, together with genomesequence information and annotation. The 7,412,387 bp high-quality-draft genomeis arranged into 5 scaffolds of 5 contigs, contains 7,317 protein-coding genesand 89 RNA-only encoding genes, and is one of 100 rhizobial genomes sequencedas part of the DOE Joint Genome Institute 2010 Genomic Encylopedia for Bacteriaand Archaea-Root Nodule Bacteria (GEBA-RNB) project.

History

Journal

Standards in genomic sciences

Volume

9

Pagination

232 - 242

Location

East Lansing, Mich.

Open access

  • Yes

ISSN

1944-3277

Language

eng

Publication classification

C1 Refereed article in a scholarly journal

Copyright notice

2013, The Authors