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Large-scale biological sequence assembly and alignment by using computing grid

journal contribution
posted on 2004-01-01, 00:00 authored by W Shi, Wanlei Zhou
Large-scale sequence assembly and alignment are fundamental parts of biological computing. However, most of the large-scale sequence assembly and alignment require intensive computing power and normally take very long time to complete. To speedup the assembly and alignment process, this paper parallelizes the Euler sequence assembly and pair-wise/multiple sequence assembly, two important sequence assembly methods, and takes advantage of Computing Grid which has a colossal computing capacity to meet the large-scale biological computing demand.

History

Journal

Lecture notes in computer science

Volume

3032

Pagination

26 - 33

Publisher

Springer-Verlag

Location

Berlin, Germany

ISSN

0302-9743

eISSN

1611-3349

Language

eng

Publication classification

C1 Refereed article in a scholarly journal

Copyright notice

2004, Springer-Verlag

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