Deakin University
Browse

Selected approaches and frameworks to carry out genomic data provision and analysis on the cloud

Download (1.1 MB)
Version 2 2024-06-04, 07:04
Version 1 2015-03-30, 17:14
journal contribution
posted on 2015-01-01, 00:00 authored by Philip Church, Andrzej GoscinskiAndrzej Goscinski
© 2015 SCPE. While High Performance Computing clouds allow researchers to process large amounts of genomic data, complex resource and software configuration tasks must be carried out beforehand. The current trend exposes applications and data as services, simplifying access to clouds. This paper examines commonly used cloud-based genomic analysis services, introduces the approach of exposing data as services and proposes two new solutions (HPCaaS and Uncinus) which aim to automate service development, deployment process and data provision. By comparing and contrasting these solutions, we identify key mechanisms of service creation, execution and data access required to support non-computing specialists employing clouds.

History

Journal

Scalable computing

Volume

16

Issue

1

Pagination

19 - 35

Publisher

West University of Timisoara

Location

Timisoara, Romania

ISSN

1895-1767

Language

eng

Publication classification

C Journal article; C1 Refereed article in a scholarly journal

Copyright notice

2015, West University of Timisoara

Usage metrics

    Research Publications

    Categories

    No categories selected

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC