Deakin University
Browse
richardson-drosophilamelanogaster-2012.pdf (857.3 kB)

The Drosophila melanogaster Genetic Reference Panel

Download (857.3 kB)
Version 2 2024-06-04, 12:10
Version 1 2016-09-29, 09:29
journal contribution
posted on 2024-06-04, 12:10 authored by TFC Mackay, S Richards, EA Stone, A Barbadilla, JF Ayroles, D Zhu, S Casillas, Y Han, MM Magwire, JM Cridland, Mark RichardsonMark Richardson, RRH Anholt, M Barrón, C Bess, KP Blankenburg, MA Carbone, D Castellano, L Chaboub, L Duncan, Z Harris, M Javaid, JC Jayaseelan, SN Jhangiani, KW Jordan, F Lara, F Lawrence, SL Lee, P Librado, RS Linheiro, RF Lyman, AJ Mackey, M Munidasa, DM Muzny, L Nazareth, I Newsham, L Perales, L-L Pu, C Qu, M Ràmia, JG Reid, SM Rollmann, J Rozas, N Saada, L Turlapati, KC Worley, Y-Q Wu, A Yamamoto, Y Zhu, CM Bergman, KR Thornton, D Mittelman, RA Gibbs
A major challenge of biology is understanding the relationship between molecular genetic variation and variation in quantitative traits, including fitness. This relationship determines our ability to predict phenotypes from genotypes and to understand how evolutionary forces shape variation within and between species. Previous efforts to dissect the genotype-phenotype map were based on incomplete genotypic information. Here, we describe the Drosophila melanogaster Genetic Reference Panel (DGRP), a community resource for analysis of population genomics and quantitative traits. The DGRP consists of fully sequenced inbred lines derived from a natural population. Population genomic analyses reveal reduced polymorphism in centromeric autosomal regions and the X chromosome, evidence for positive and negative selection, and rapid evolution of the X chromosome. Many variants in novel genes, most at low frequency, are associated with quantitative traits and explain a large fraction of the phenotypic variance. The DGRP facilitates genotype-phenotype mapping using the power of Drosophila genetics.

History

Journal

Nature

Volume

482

Pagination

173-178

Location

London, Eng.

eISSN

1476-4687

Language

eng

Publication classification

C Journal article, C1.1 Refereed article in a scholarly journal

Copyright notice

2012, Macmillan Publishers Limited

Issue

7384

Publisher

Nature Publishing Group